Code
Ctrlk
  • Apps-for-video
  • csvkit
  • Git Bash
  • Image Analysis
  • Image Magick
  • Bioinfo
    • gene-expression-chipseq
    • Processing the ChIP-seq data
  • Scripts-R
  • Filter table by file
  • Scripts-BASH
    • Download multiple files
    • Move files into folders based on patterns
    • Reorganize daily images
    • Find files by date
    • Check for file as argument
    • Make folder month-day-time
    • SPlit all ome.tiff images to channels
    • Adjust and convert tifs to jpgs
    • Create panels in all folders
    • Copy folder structure, but not the files
    • Remove redundant parts of filenames
    • Forward date
    • Parse date
  • tooling-scripts
  • BASH
    • configs
    • uniq
    • date
    • rename
    • sed
    • cp
    • tree
    • git shortcuts
    • grep
    • parameter expansion
    • cut
    • join
    • sort
    • panels - image magick
    • mount network drive
    • copy nested folder
  • notes bashguide
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Scripts-BASH

Download multiple filesMove files into folders based on patternsReorganize daily imagesFind files by dateCheck for file as argumentMake folder month-day-timeSPlit all ome.tiff images to channelsAdjust and convert tifs to jpgsCreate panels in all foldersCopy folder structure, but not the filesRemove redundant parts of filenamesForward dateParse date
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